STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379685_00705Unannotated protein. (320 aa)    
Predicted Functional Partners:
GCA_000379685_00704
Unannotated protein.
 
     0.956
GCA_000379685_00706
Unannotated protein.
 
     0.912
GCA_000379685_00707
Unannotated protein.
 
   
 0.894
GCA_000379685_00703
Unannotated protein.
 
     0.869
GCA_000379685_00723
Unannotated protein.
 
   
 0.827
GCA_000379685_03835
Unannotated protein.
 
     0.788
GCA_000379685_00724
Unannotated protein.
  
     0.768
GCA_000379685_00857
Unannotated protein.
  
     0.744
GCA_000379685_00756
Unannotated protein.
  
     0.725
GCA_000379685_03919
Unannotated protein.
  
     0.630
Your Current Organism:
Catelliglobosispora koreensis
NCBI taxonomy Id: 1121272
Other names: C. koreensis DSM 44566, Catelliglobosispora koreensis DSM 44566, Catelliglobosispora koreensis LM 042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.