STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379685_03319Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_000379685_03317
Unannotated protein.
       0.875
GCA_000379685_03318
Unannotated protein.
       0.832
GCA_000379685_03316
Unannotated protein.
       0.823
GCA_000379685_03320
Unannotated protein.
       0.567
GCA_000379685_07517
Unannotated protein.
   
    0.561
GCA_000379685_01785
Unannotated protein.
    
  0.556
GCA_000379685_05196
Unannotated protein.
    
  0.556
GCA_000379685_04165
Unannotated protein.
    
  0.552
GCA_000379685_02522
Unannotated protein.
    
  0.541
GCA_000379685_02305
Unannotated protein.
   
    0.461
Your Current Organism:
Catelliglobosispora koreensis
NCBI taxonomy Id: 1121272
Other names: C. koreensis DSM 44566, Catelliglobosispora koreensis DSM 44566, Catelliglobosispora koreensis LM 042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.