STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379685_05326Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_000379685_05324
Unannotated protein.
 
     0.642
GCA_000379685_05322
Unannotated protein.
       0.580
GCA_000379685_05323
Unannotated protein.
       0.580
GCA_000379685_05325
Unannotated protein.
       0.580
GCA_000379685_05327
Unannotated protein.
       0.558
GCA_000379685_05694
Unannotated protein.
  
     0.519
GCA_000379685_01094
Unannotated protein.
  
     0.497
GCA_000379685_02649
Unannotated protein.
  
     0.496
GCA_000379685_05321
Unannotated protein.
       0.492
GCA_000379685_00499
Unannotated protein.
  
     0.480
Your Current Organism:
Catelliglobosispora koreensis
NCBI taxonomy Id: 1121272
Other names: C. koreensis DSM 44566, Catelliglobosispora koreensis DSM 44566, Catelliglobosispora koreensis LM 042
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.