STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428465_01037Unannotated protein. (283 aa)    
Predicted Functional Partners:
GCA_000428465_01033
Unannotated protein.
 0.849
GCA_000428465_04592
Unannotated protein.
  
    0.842
GCA_000428465_02518
Unannotated protein.
  
 
 0.833
GCA_000428465_01038
Unannotated protein.
  
    0.758
GCA_000428465_00635
Unannotated protein.
  
 
 0.732
GCA_000428465_01035
Unannotated protein.
 
     0.716
GCA_000428465_02626
Unannotated protein.
  
 
 0.703
GCA_000428465_03193
Unannotated protein.
    
  0.688
GCA_000428465_02511
Unannotated protein.
  
  
 
0.680
GCA_000428465_04517
Unannotated protein.
  
 0.680
Your Current Organism:
Chitinimonas koreensis
NCBI taxonomy Id: 1121278
Other names: C. koreensis DSM 17726, Chitinimonas koreensis DSM 17726
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.