STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428465_02893Unannotated protein. (379 aa)    
Predicted Functional Partners:
GCA_000428465_02894
Unannotated protein.
       0.773
GCA_000428465_04385
Unannotated protein.
 
  
  0.641
GCA_000428465_01118
Unannotated protein.
  
  
  0.600
GCA_000428465_03360
Unannotated protein.
    
 0.581
GCA_000428465_02889
Unannotated protein.
       0.565
GCA_000428465_02890
Unannotated protein.
       0.565
GCA_000428465_02891
Unannotated protein.
       0.565
GCA_000428465_02892
Unannotated protein.
       0.565
GCA_000428465_03579
Unannotated protein.
    
  0.554
GCA_000428465_03506
Unannotated protein.
    
 0.543
Your Current Organism:
Chitinimonas koreensis
NCBI taxonomy Id: 1121278
Other names: C. koreensis DSM 17726, Chitinimonas koreensis DSM 17726
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.