STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428465_04136Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_000428465_04135
Unannotated protein.
       0.787
GCA_000428465_00247
Unannotated protein.
    
  0.678
GCA_000428465_04407
Unannotated protein.
  
  
 0.638
GCA_000428465_04314
Unannotated protein.
   
  
 0.631
GCA_000428465_01386
Unannotated protein.
    
  0.564
GCA_000428465_03468
Unannotated protein.
    
  0.550
GCA_000428465_02687
Unannotated protein.
    
  0.538
GCA_000428465_02197
Unannotated protein.
    
  0.527
GCA_000428465_00813
Unannotated protein.
  
  
 0.508
GCA_000428465_02029
Unannotated protein.
  
  
 0.508
Your Current Organism:
Chitinimonas koreensis
NCBI taxonomy Id: 1121278
Other names: C. koreensis DSM 17726, Chitinimonas koreensis DSM 17726
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.