STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428465_04154Unannotated protein. (205 aa)    
Predicted Functional Partners:
GCA_000428465_04146
Unannotated protein.
 
   
 0.806
GCA_000428465_04134
Unannotated protein.
 
     0.802
GCA_000428465_04138
Unannotated protein.
 
     0.802
GCA_000428465_04142
Unannotated protein.
 
     0.802
GCA_000428465_04140
Unannotated protein.
 
     0.801
GCA_000428465_04143
Unannotated protein.
 
     0.800
GCA_000428465_04153
Unannotated protein.
       0.800
GCA_000428465_04148
Unannotated protein.
 
     0.799
GCA_000428465_04151
Unannotated protein.
 
     0.798
GCA_000428465_04149
Unannotated protein.
 
     0.793
Your Current Organism:
Chitinimonas koreensis
NCBI taxonomy Id: 1121278
Other names: C. koreensis DSM 17726, Chitinimonas koreensis DSM 17726
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.