STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ79063.1Stage V sporulation protein R. (524 aa)    
Predicted Functional Partners:
SFZ79064.1
Hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.997
SFZ79065.1
Putative serine protein kinase, PrkA.
 
  
 0.995
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.710
SFZ79538.1
Hypothetical protein.
   
  
 0.644
SFZ70556.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.591
SFZ77858.1
Hypothetical protein.
   
    0.528
SFZ78191.1
Barstar (barnase inhibitor).
   
    0.475
SFZ77378.1
PhoH-like ATPase.
   
    0.467
SFZ75872.1
psiF repeat-containing protein.
   
    0.457
SFZ77684.1
Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family.
   
    0.412
Your Current Organism:
Chitinimonas taiwanensis
NCBI taxonomy Id: 1121279
Other names: C. taiwanensis DSM 18899, Chitinimonas taiwanensis DSM 18899
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