STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374805_00387Unannotated protein. (364 aa)    
Predicted Functional Partners:
GCA_000374805_03615
Unannotated protein.
  
 0.956
GCA_000374805_01375
Unannotated protein.
   
    0.740
GCA_000374805_01578
Unannotated protein.
  
    0.704
GCA_000374805_01091
Unannotated protein.
  
    0.605
GCA_000374805_01411
Unannotated protein.
  
    0.603
GCA_000374805_02388
Unannotated protein.
   
    0.515
GCA_000374805_01572
Unannotated protein.
 
    0.511
GCA_000374805_00774
Unannotated protein.
  
    0.496
GCA_000374805_00091
Unannotated protein.
  
  
 0.487
GCA_000374805_02959
Unannotated protein.
     
 0.484
Your Current Organism:
Chitiniphilus shinanonensis
NCBI taxonomy Id: 1121280
Other names: C. shinanonensis DSM 23277, Chitiniphilus shinanonensis DSM 23277, Chitiniphilus shinanonensis SAY3, Neisseriaceae bacterium SAY3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.