STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374805_00678Unannotated protein. (292 aa)    
Predicted Functional Partners:
GCA_000374805_00790
Unannotated protein.
 
 0.999
GCA_000374805_03105
Unannotated protein.
 0.999
GCA_000374805_00402
Unannotated protein.
 
 
0.995
GCA_000374805_03528
Unannotated protein.
 
 0.987
GCA_000374805_01118
Unannotated protein.
 
 0.984
GCA_000374805_02328
Unannotated protein.
 
 0.979
GCA_000374805_01507
Unannotated protein.
 
  
 0.961
GCA_000374805_01509
Unannotated protein.
 
 
 0.956
GCA_000374805_00002
Unannotated protein.
    
 
 0.863
GCA_000374805_01530
Unannotated protein.
    
 
 0.863
Your Current Organism:
Chitiniphilus shinanonensis
NCBI taxonomy Id: 1121280
Other names: C. shinanonensis DSM 23277, Chitiniphilus shinanonensis DSM 23277, Chitiniphilus shinanonensis SAY3, Neisseriaceae bacterium SAY3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.