STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374805_01110Unannotated protein. (435 aa)    
Predicted Functional Partners:
GCA_000374805_01229
Unannotated protein.
   
   0.892
GCA_000374805_03154
Unannotated protein.
    
 0.782
GCA_000374805_03023
Unannotated protein.
    
  0.777
GCA_000374805_01109
Unannotated protein.
  
  
 0.746
GCA_000374805_03479
Unannotated protein.
    
  0.711
GCA_000374805_03480
Unannotated protein.
    
  0.711
GCA_000374805_00065
Unannotated protein.
  
 0.680
GCA_000374805_00839
Unannotated protein.
    
 0.648
GCA_000374805_01834
Unannotated protein.
 
    0.598
GCA_000374805_00825
Unannotated protein.
 
 
  0.591
Your Current Organism:
Chitiniphilus shinanonensis
NCBI taxonomy Id: 1121280
Other names: C. shinanonensis DSM 23277, Chitiniphilus shinanonensis DSM 23277, Chitiniphilus shinanonensis SAY3, Neisseriaceae bacterium SAY3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.