STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374805_01163Unannotated protein. (221 aa)    
Predicted Functional Partners:
GCA_000374805_02884
Unannotated protein.
   
 0.987
GCA_000374805_01080
Unannotated protein.
    
 0.980
GCA_000374805_00625
Unannotated protein.
    
 0.966
GCA_000374805_00626
Unannotated protein.
    
 0.966
GCA_000374805_03608
Unannotated protein.
    
 0.966
GCA_000374805_01186
Unannotated protein.
   
 0.952
GCA_000374805_03114
Unannotated protein.
   
 0.952
GCA_000374805_03115
Unannotated protein.
   
 0.952
GCA_000374805_00178
Unannotated protein.
    
 0.921
GCA_000374805_00740
Unannotated protein.
    
 0.921
Your Current Organism:
Chitiniphilus shinanonensis
NCBI taxonomy Id: 1121280
Other names: C. shinanonensis DSM 23277, Chitiniphilus shinanonensis DSM 23277, Chitiniphilus shinanonensis SAY3, Neisseriaceae bacterium SAY3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.