STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374805_01281Unannotated protein. (605 aa)    
Predicted Functional Partners:
GCA_000374805_02819
Unannotated protein.
 
     0.921
GCA_000374805_01229
Unannotated protein.
    
 0.834
GCA_000374805_03575
Unannotated protein.
    
 0.799
GCA_000374805_02879
Unannotated protein.
    
  0.792
GCA_000374805_00880
Unannotated protein.
     
 0.728
GCA_000374805_02074
Unannotated protein.
     
 0.728
GCA_000374805_02133
Unannotated protein.
    
 0.625
GCA_000374805_01270
Unannotated protein.
  
  
  0.531
GCA_000374805_02253
Unannotated protein.
    
 0.525
GCA_000374805_00238
Unannotated protein.
    
 0.489
Your Current Organism:
Chitiniphilus shinanonensis
NCBI taxonomy Id: 1121280
Other names: C. shinanonensis DSM 23277, Chitiniphilus shinanonensis DSM 23277, Chitiniphilus shinanonensis SAY3, Neisseriaceae bacterium SAY3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.