STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430845_02119Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000430845_02118
Unannotated protein.
       0.845
GCA_000430845_01781
Unannotated protein.
  
 
 0.776
GCA_000430845_01127
Unannotated protein.
  
     0.739
GCA_000430845_01126
Unannotated protein.
  
     0.737
GCA_000430845_02242
Unannotated protein.
  
     0.730
GCA_000430845_02806
Unannotated protein.
  
     0.646
GCA_000430845_02117
Unannotated protein.
       0.580
GCA_000430845_02870
Unannotated protein.
  
     0.579
GCA_000430845_01932
Unannotated protein.
 
     0.559
GCA_000430845_03776
Unannotated protein.
  
     0.555
Your Current Organism:
Chryseobacterium gregarium
NCBI taxonomy Id: 1121287
Other names: C. gregarium DSM 19109, Chryseobacterium gregarium DSM 19109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.