STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422265_02108Unannotated protein. (397 aa)    
Predicted Functional Partners:
GCA_000422265_02109
Unannotated protein.
 
     0.889
GCA_000422265_02110
Unannotated protein.
 
  
  0.848
GCA_000422265_00206
Unannotated protein.
    
  0.613
GCA_000422265_02107
Unannotated protein.
       0.565
GCA_000422265_02420
Unannotated protein.
  
     0.525
GCA_000422265_02173
Unannotated protein.
  
     0.486
GCA_000422265_02646
Unannotated protein.
  
     0.484
GCA_000422265_00314
Unannotated protein.
  
     0.463
GCA_000422265_01513
Unannotated protein.
  
     0.460
GCA_000422265_02325
Unannotated protein.
  
     0.449
Your Current Organism:
Chryseobacterium palustre
NCBI taxonomy Id: 1121288
Other names: C. palustre DSM 21579, Chryseobacterium palustre 3A10, Chryseobacterium palustre DSM 21579, Flavobacteriaceae bacterium 3A10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.