STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620125_01240Unannotated protein. (129 aa)    
Predicted Functional Partners:
GCA_000620125_01241
Unannotated protein.
 
     0.576
GCA_000620125_01987
Unannotated protein.
    
 0.541
GCA_000620125_01239
Unannotated protein.
       0.528
GCA_000620125_01242
Unannotated protein.
       0.515
GCA_000620125_01243
Unannotated protein.
       0.490
GCA_000620125_01184
Unannotated protein.
    
 0.482
GCA_000620125_00606
Unannotated protein.
     
 0.447
GCA_000620125_01317
Unannotated protein.
  
 
  0.417
Your Current Organism:
Clostridiisalibacter paucivorans
NCBI taxonomy Id: 1121289
Other names: C. paucivorans DSM 22131, Clostridiisalibacter paucivorans DSM 22131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.