STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620125_01551Unannotated protein. (123 aa)    
Predicted Functional Partners:
GCA_000620125_01550
Unannotated protein.
    0.999
GCA_000620125_01549
Unannotated protein.
 
    0.919
GCA_000620125_01545
Unannotated protein.
 
    0.879
GCA_000620125_01546
Unannotated protein.
 
    0.728
GCA_000620125_02574
Unannotated protein.
 
    0.662
GCA_000620125_01013
Unannotated protein.
 
    0.584
GCA_000620125_01548
Unannotated protein.
       0.545
GCA_000620125_01552
Unannotated protein.
       0.464
GCA_000620125_01547
Unannotated protein.
       0.461
GCA_000620125_01553
Unannotated protein.
       0.431
Your Current Organism:
Clostridiisalibacter paucivorans
NCBI taxonomy Id: 1121289
Other names: C. paucivorans DSM 22131, Clostridiisalibacter paucivorans DSM 22131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.