STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000686725_01222Unannotated protein. (168 aa)    
Predicted Functional Partners:
GCA_000686725_02555
Unannotated protein.
  
 
 0.743
GCA_000686725_01224
Unannotated protein.
 
 
  0.693
GCA_000686725_01221
Unannotated protein.
       0.686
GCA_000686725_03931
Unannotated protein.
   
 
 0.605
GCA_000686725_03295
Unannotated protein.
  
    0.591
GCA_000686725_01223
Unannotated protein.
 
    
0.565
GCA_000686725_02198
Unannotated protein.
   
 
 0.557
GCA_000686725_02199
Unannotated protein.
   
 
 0.557
GCA_000686725_03220
Unannotated protein.
   
 
 0.557
GCA_000686725_03221
Unannotated protein.
   
 
 0.557
Your Current Organism:
Clostridium akagii
NCBI taxonomy Id: 1121293
Other names: C. akagii DSM 12554, Clostridium akagii DSM 12554
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.