STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ52844.1Transcriptional regulator, ArsR family. (122 aa)    
Predicted Functional Partners:
SHJ52866.1
Cd2+/Zn2+-exporting ATPase.
 
  
 0.961
SHK26511.1
Cu+-exporting ATPase.
 
  
 0.617
SHK26533.1
Copper ion binding protein.
 
  
 0.576
SHJ73972.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.491
SHJ75694.1
Transcriptional regulator, ArsR family.
  
     0.458
SHJ48506.1
ADP-ribose pyrophosphatase.
    
  0.436
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.436
SHK24238.1
2-enoate reductase.
 
   
 0.418
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.