STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ73526.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
SHJ73567.1
Peptide/nickel transport system permease protein.
 
  0.984
SHJ54730.1
Oligopeptide transport system permease protein.
 
 
  0.933
SHJ99532.1
Peptide/nickel transport system permease protein.
 
 
  0.928
SHK11868.1
Oligopeptide transport system permease protein.
 
 
  0.927
SHJ97995.1
Glutathione transport system permease protein.
 
 
  0.922
SHJ71097.1
Peptide/nickel transport system permease protein.
 
 
  0.920
SHJ61270.1
Glutathione transport system permease protein.
 
 
  0.910
SHK01333.1
Peptide/nickel transport system permease protein.
 
 
  0.877
SHJ73589.1
Peptide/nickel transport system permease protein.
 
  0.841
SHK31725.1
Peptide/nickel transport system permease protein.
 
 
  0.832
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.