STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ88077.1Two-component system, NtrC family, sensor histidine kinase AtoS. (488 aa)    
Predicted Functional Partners:
SHJ88065.1
Two-component system, NtrC family, response regulator AtoC.
  0.926
SHJ97655.1
Signal transduction histidine kinase.
 
0.896
SHJ78722.1
Response regulator receiver domain-containing protein.
 
  0.850
SHJ93495.1
PAS domain S-box-containing protein.
   
 0.841
SHJ97616.1
Response regulator receiver modulated diguanylate cyclase.
  
 0.826
SHJ53242.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
  0.822
SHK56820.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.820
SHK10735.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
  0.819
SHJ98104.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.804
SHJ86302.1
Two-component system, OmpR family, response regulator ResD.
 
  0.801
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.