Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHJ99345.1 | SHJ99359.1 | SAMN02745912_01878 | SAMN02745912_01879 | N-acetylmuramoyl-L-alanine amidase. | Uncharacterized protein YebE, UPF0316 family. | 0.579 |
| SHJ99345.1 | SHJ99375.1 | SAMN02745912_01878 | SAMN02745912_01880 | N-acetylmuramoyl-L-alanine amidase. | Germination protein M. | 0.555 |
| SHJ99345.1 | SHJ99436.1 | SAMN02745912_01878 | SAMN02745912_01883 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.400 |
| SHJ99345.1 | rph | SAMN02745912_01878 | SAMN02745912_01881 | N-acetylmuramoyl-L-alanine amidase. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.413 |
| SHJ99359.1 | SHJ99345.1 | SAMN02745912_01879 | SAMN02745912_01878 | Uncharacterized protein YebE, UPF0316 family. | N-acetylmuramoyl-L-alanine amidase. | 0.579 |
| SHJ99359.1 | SHJ99375.1 | SAMN02745912_01879 | SAMN02745912_01880 | Uncharacterized protein YebE, UPF0316 family. | Germination protein M. | 0.438 |
| SHJ99359.1 | SHJ99436.1 | SAMN02745912_01879 | SAMN02745912_01883 | Uncharacterized protein YebE, UPF0316 family. | Hypothetical protein. | 0.417 |
| SHJ99359.1 | rph | SAMN02745912_01879 | SAMN02745912_01881 | Uncharacterized protein YebE, UPF0316 family. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.411 |
| SHJ99375.1 | SHJ99345.1 | SAMN02745912_01880 | SAMN02745912_01878 | Germination protein M. | N-acetylmuramoyl-L-alanine amidase. | 0.555 |
| SHJ99375.1 | SHJ99359.1 | SAMN02745912_01880 | SAMN02745912_01879 | Germination protein M. | Uncharacterized protein YebE, UPF0316 family. | 0.438 |
| SHJ99375.1 | SHJ99436.1 | SAMN02745912_01880 | SAMN02745912_01883 | Germination protein M. | Hypothetical protein. | 0.479 |
| SHJ99375.1 | rph | SAMN02745912_01880 | SAMN02745912_01881 | Germination protein M. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.539 |
| SHJ99436.1 | SHJ99345.1 | SAMN02745912_01883 | SAMN02745912_01878 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.400 |
| SHJ99436.1 | SHJ99359.1 | SAMN02745912_01883 | SAMN02745912_01879 | Hypothetical protein. | Uncharacterized protein YebE, UPF0316 family. | 0.417 |
| SHJ99436.1 | SHJ99375.1 | SAMN02745912_01883 | SAMN02745912_01880 | Hypothetical protein. | Germination protein M. | 0.479 |
| SHJ99436.1 | rph | SAMN02745912_01883 | SAMN02745912_01881 | Hypothetical protein. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.815 |
| rph | SHJ99345.1 | SAMN02745912_01881 | SAMN02745912_01878 | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | N-acetylmuramoyl-L-alanine amidase. | 0.413 |
| rph | SHJ99359.1 | SAMN02745912_01881 | SAMN02745912_01879 | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Uncharacterized protein YebE, UPF0316 family. | 0.411 |
| rph | SHJ99375.1 | SAMN02745912_01881 | SAMN02745912_01880 | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Germination protein M. | 0.539 |
| rph | SHJ99436.1 | SAMN02745912_01881 | SAMN02745912_01883 | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Hypothetical protein. | 0.815 |