STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK01372.1Peptide/nickel transport system substrate-binding protein. (555 aa)    
Predicted Functional Partners:
SHK01351.1
Peptide/nickel transport system permease protein.
  0.939
SHK01333.1
Peptide/nickel transport system permease protein.
 0.926
SHJ61252.1
Glutathione transport system permease protein.
  0.807
SHJ61270.1
Glutathione transport system permease protein.
 0.801
SHJ98012.1
Glutathione transport system permease protein.
  0.801
SHJ97995.1
Glutathione transport system permease protein.
 0.789
SHK11844.1
Peptide/nickel transport system permease protein.
  0.772
SHJ73972.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
    0.760
SHJ99518.1
Peptide/nickel transport system permease protein.
  0.741
SHK01317.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.727
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.