STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK17018.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (168 aa)    
Predicted Functional Partners:
SHK47047.1
Formate dehydrogenase major subunit.
 
 
 0.893
SHJ55168.1
Putative selenate reductase.
  
 
 0.841
SHK19072.1
Amino acid adenylation domain-containing protein.
    
  0.810
SHK22872.1
Thioesterase domain-containing protein.
    
 0.799
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.660
SHK04436.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.641
SHK39970.1
Nitroreductase.
  
 
 0.618
SHK53200.1
Putative TM nitroreductase.
 
 
 0.604
SHJ48253.1
NAD(P)H-flavin reductase.
 
 
  0.594
SHK10267.1
AMP-binding enzyme.
    
  0.589
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.