STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK52563.1PTS system, cellobiose-specific IIA component. (106 aa)    
Predicted Functional Partners:
SHK52599.1
PTS system, cellobiose-specific IIB component.
 
 0.998
SHK07102.1
PTS system, cellobiose-specific IIB component.
 
 0.996
SHK52580.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.989
SHK07129.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.978
SHK52539.1
6-phospho-beta-glucosidase.
 
 
 0.960
SHJ55768.1
Transcriptional antiterminator.
 
 
 0.881
SHK52523.1
Hypothetical protein.
 
  
 0.858
SHK07155.1
6-phospho-beta-glucosidase.
 
 
 0.854
SHJ86092.1
Lichenan operon transcriptional antiterminator.
 
  
 0.811
SHK07029.1
Sigma 54 modulation protein.
 
   
 0.794
Your Current Organism:
Paramaledivibacter caminithermalis
NCBI taxonomy Id: 1121301
Other names: Clostridium caminithermale DSM 15212, P. caminithermalis DSM 15212, Paramaledivibacter caminithermalis DSM 15212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.