STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH29294.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
SHH98944.1
MazG-like family protein.
  
     0.768
SHI03350.1
Hypothetical protein.
  
     0.748
SHH29332.1
Adenylate cyclase, class 2.
 
     0.734
SHH39619.1
Tetratricopeptide repeat-containing protein.
  
     0.734
SHH57861.1
Outer membrane lipoprotein-sorting protein.
  
     0.726
SHH49872.1
Endodeoxyribonuclease RusA.
  
     0.725
SHH51430.1
LysM domain-containing protein.
  
     0.723
SHH29314.1
Hypothetical protein.
       0.719
SHH18631.1
Sporulation protein, YlmC/YmxH family.
  
     0.671
SHH26461.1
Hypothetical protein.
  
     0.669
Your Current Organism:
Clostridium grantii
NCBI taxonomy Id: 1121316
Other names: C. grantii DSM 8605, Clostridium grantii DSM 8605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.