STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000686705_00148Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000686705_00149
Unannotated protein.
 
 
 0.995
GCA_000686705_00150
Unannotated protein.
 
 
 0.995
GCA_000686705_01567
Unannotated protein.
 
 
 0.936
GCA_000686705_02434
Unannotated protein.
 
 
 0.933
GCA_000686705_01571
Unannotated protein.
 
 
 0.885
GCA_000686705_02436
Unannotated protein.
  
 
 0.872
GCA_000686705_03344
Unannotated protein.
    
 
0.778
GCA_000686705_03346
Unannotated protein.
    
 
0.778
GCA_000686705_02129
Unannotated protein.
  
  
  0.759
GCA_000686705_02130
Unannotated protein.
    
  0.717
Your Current Organism:
Clostridium hydrogeniformans
NCBI taxonomy Id: 1121319
Other names: C. hydrogeniformans DSM 21757, Clostridium hydrogeniformans BL-20, Clostridium hydrogeniformans DSM 21757, Clostridium sp. BL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.