STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG77874.1Asparagine synthase (glutamine-hydrolysing). (616 aa)    
Predicted Functional Partners:
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 
 0.884
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.882
SHG38047.1
L-asparaginase.
     
 0.868
SHH41949.1
Aspartate aminotransferase.
   
 
 0.861
SHG55033.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.836
SHG90376.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.836
asnA
Aspartate-ammonia ligase.
   
 
 0.831
SHG38108.1
Argininosuccinate synthase.
   
 0.814
SHG38141.1
Argininosuccinate synthase.
   
 0.814
SHG90927.1
Aspartate aminotransferase.
   
 
 0.809
Your Current Organism:
Asaccharospora irregularis
NCBI taxonomy Id: 1121321
Other names: A. irregularis DSM 2635, Asaccharospora irregularis DSM 2635, Clostridium irregulare DSM 2635
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