STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG82108.1Amino acid ABC transporter membrane protein 1, PAAT family. (231 aa)    
Predicted Functional Partners:
SHG38225.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  0.982
SHG82172.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.982
SHG82218.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.970
SHG49365.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.966
SHG74106.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  0.928
SHG49432.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.923
SHH49779.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.921
SHG38168.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.920
SHG74038.1
Polar amino acid transport system ATP-binding protein.
  0.913
SHG82142.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  
 
0.909
Your Current Organism:
Asaccharospora irregularis
NCBI taxonomy Id: 1121321
Other names: A. irregularis DSM 2635, Asaccharospora irregularis DSM 2635, Clostridium irregulare DSM 2635
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