STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG95723.1Spermidine/putrescine transport system permease protein. (280 aa)    
Predicted Functional Partners:
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 0.998
SHG95756.1
Spermidine/putrescine transport system permease protein.
 
0.998
SHG95790.1
Spermidine/putrescine transport system substrate-binding protein.
 
 0.996
SHG53696.1
Spermidine/putrescine transport system substrate-binding protein.
 
 0.981
SHG78792.1
ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components.
 0.946
SHG78819.1
Putative spermidine/putrescine transport system permease protein.
 
0.886
SHG95658.1
Cupin domain-containing protein.
 
    0.785
SHG78877.1
Putative spermidine/putrescine transport system substrate-binding protein.
    
  0.713
SHH41808.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.644
SHH41761.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
 
  0.459
Your Current Organism:
Asaccharospora irregularis
NCBI taxonomy Id: 1121321
Other names: A. irregularis DSM 2635, Asaccharospora irregularis DSM 2635, Clostridium irregulare DSM 2635
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.