STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH24368.1Formate C-acetyltransferase. (789 aa)    
Predicted Functional Partners:
SHH24336.1
Pyruvate formate lyase activating enzyme.
  
 0.990
SHG77941.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.963
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.901
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
     
 0.885
SHH18066.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.880
SHG37958.1
Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
  
 0.859
SHH17678.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
     
 0.798
SHH17649.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
     
 0.798
SHH43858.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.763
SHG95287.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
   
 
 0.761
Your Current Organism:
Asaccharospora irregularis
NCBI taxonomy Id: 1121321
Other names: A. irregularis DSM 2635, Asaccharospora irregularis DSM 2635, Clostridium irregulare DSM 2635
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.