STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95374.12-hydroxyglutaryl-CoA dehydratase D-component. (425 aa)    
Predicted Functional Partners:
KDR95372.1
Putative CoA-substrate-specific protein.
 0.973
KDR93945.1
Putative CoA-substrate-specific protein.
 0.952
fldB
R-phenyllactate dehydratase subunit alpha.
 
 
 0.948
fldI2
R-phenyllactate dehydratase activator.
 0.919
fldI
R-phenyllactate dehydratase activator.
 0.849
fldI1
R-phenyllactate dehydratase activator.
 0.849
KDR95373.1
Hypothetical protein.
       0.664
KDR96368.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
    0.522
bcd1
acyl-CoA dehydrogenase, short-chain specific.
    
 0.480
bcd2
acyl-CoA dehydrogenase, short-chain specific.
    
 0.480
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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