STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95543.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
KDR94146.1
Radical SAM domain-containing protein.
     0.969
KDR96348.1
DnaD domain-containing protein.
  
     0.751
KDR94381.1
Putative N-glycosylase/DNA lyase.
  
     0.708
KDR95285.1
Hypothetical protein.
  
     0.704
KDR93858.1
Hypothetical protein.
  
     0.704
KDR96349.1
IstB-like ATP binding family protein.
  
     0.671
rpoZ
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.611
KDR94916.1
Hypothetical protein.
  
     0.561
grdB2
Glycine reductase complex component B subunit gamma.
       0.536
KDR94193.1
Transcriptional regulator, RpiR family.
  
     0.507
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.