STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95663.1Putative nucleotidase; Belongs to the 5'(3')-deoxyribonucleotidase family. (188 aa)    
Predicted Functional Partners:
KDR95665.1
Calcineurin-like phosphoesterase family protein.
      0.786
KDR95662.1
Hypothetical protein.
       0.751
KDR95664.1
Methyltransferase TRM13 family protein.
 
     0.602
KDR95995.1
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.462
KDR96371.1
Putative transcriptional regulator.
  
     0.456
KDR95667.1
Putative guanosine 3',5'-bis-pyrophosphate (PpGpp) synthesis/degradation protein.
 
     0.455
cheV
Chemotaxis protein CheV.
  
     0.445
ttcA
tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family.
       0.427
KDR96120.1
HEAT repeats family protein.
  
     0.426
KDR95668.1
Putative zinc metallohydrolase, glyoxalase II family.
 
    0.413
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.