STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95668.1Putative zinc metallohydrolase, glyoxalase II family. (300 aa)    
Predicted Functional Partners:
cdr
Coenzyme A disulfide reductase Cdr; Belongs to the sulfur carrier protein TusA family.
  
 0.983
nirA
Ferredoxin--nitrite reductase NirA.
  
 
 0.832
KDR96738.1
Glyoxalase family protein.
    
 0.802
KDR96095.1
Beta-lactamase domain-containing protein.
  
  
 
0.790
KDR95442.1
Rhodanese domain-containing protein.
  
 0.782
ybeY
Endoribonuclease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.663
KDR95304.1
Hypothetical protein.
 
   
 0.621
KDR93877.1
Hypothetical protein.
 
   
 0.621
KDR95667.1
Putative guanosine 3',5'-bis-pyrophosphate (PpGpp) synthesis/degradation protein.
       0.609
nasD
Nitrite reductase [NAD(P)H].
    
 0.606
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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