STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95711.1Transposase. (204 aa)    
Predicted Functional Partners:
KDR95709.1
Transposase.
     0.986
KDR95710.1
Transposase IS4 family protein.
       0.777
KDR95714.1
Insertion sequence IS232 putative ATP-binding protein.
 
  
 0.563
KDR96403.1
DNA replication protein; Belongs to the DnaA family.
  
 0.554
istB
Insertion sequence IS21 putative ATP-binding protein IstB.
 
  
 0.519
KDR94132.1
Na+/H+ antiporter family protein.
  
     0.439
KDR96402.1
DNA replication protein.
 
  
 0.419
KDR95354.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
     0.415
KDR93927.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.