STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRAlkaline phosphatase synthesis sensor protein PhoR. (500 aa)    
Predicted Functional Partners:
resD
Transcriptional regulatory protein ResD.
 0.974
KDR95606.1
Response regulator receiver protein.
 
 0.946
barA
Signal transduction histidine-protein kinase BarA.
 
0.942
KDR95527.1
Diguanylate cyclase/phosphodiesterase.
  
 0.935
KDR96787.1
Sensor histidine kinase response regulator.
 
 
0.932
KDR94559.1
ATP-binding protein.
 0.907
cph3
Phytochrome-like protein Cph2.
  
 0.899
phoP-3
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 0.894
srrA-2
Transcriptional regulatory protein SrrA.
 0.891
KDR95118.1
Transcriptional regulator.
 0.889
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.