STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR94692.1Bacterial extracellular solute-binding family protein. (344 aa)    
Predicted Functional Partners:
fbpB
Ferric transport system permease protein FbpB.
 
 
 0.996
fbpC1
Fe(3+) ions import ATP-binding protein FbpC 1; Belongs to the ABC transporter superfamily.
 
 
 0.975
fbpB2
Fe(3+)-transport system permease protein FbpB 2.
 
 
 0.949
KDR96329.1
HAMP domain-containing protein.
   
   0.845
msmX
Maltodextrin import ATP-binding protein MsmX; Belongs to the ABC transporter superfamily.
 
 
 0.839
KDR94559.1
ATP-binding protein.
    
 0.799
yesM
Sensor histidine kinase YesM.
   
   0.789
potG
Putrescine transport ATP-binding protein PotG.
 
 
 0.738
potA
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
 
 0.706
potA-2
Spermidine/putrescine import ATP-binding protein PotA.
 
 
 0.706
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.