Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KDR95606.1 | KDR96113.1 | CLIT_10c03330 | CLIT_5c01250 | Response regulator receiver protein. | Putative CheW protein. | 0.965 |
KDR95606.1 | KDR96787.1 | CLIT_10c03330 | CLIT_2c03930 | Response regulator receiver protein. | Sensor histidine kinase response regulator. | 0.999 |
KDR95606.1 | cheA | CLIT_10c03330 | CLIT_11c02140 | Response regulator receiver protein. | Chemotaxis protein CheA. | 0.985 |
KDR95606.1 | cheA-2 | CLIT_10c03330 | CLIT_14c00190 | Response regulator receiver protein. | Chemotaxis protein CheA. | 0.985 |
KDR95606.1 | cheB | CLIT_10c03330 | CLIT_11c02130 | Response regulator receiver protein. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.969 |
KDR95606.1 | cheD | CLIT_10c03330 | CLIT_11c02170 | Response regulator receiver protein. | Putative chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.918 |
KDR95606.1 | cheR | CLIT_10c03330 | CLIT_11c01830 | Response regulator receiver protein. | Chemotaxis protein methyltransferase CheR. | 0.960 |
KDR95606.1 | cheV | CLIT_10c03330 | CLIT_14c00090 | Response regulator receiver protein. | Chemotaxis protein CheV. | 0.998 |
KDR95606.1 | cheW | CLIT_10c03330 | CLIT_11c02150 | Response regulator receiver protein. | Purine-binding chemotaxis protein CheW. | 0.965 |
KDR95606.1 | tlpB-2 | CLIT_10c03330 | CLIT_13c02170 | Response regulator receiver protein. | Methyl-accepting chemotaxis protein TlpB. | 0.895 |
KDR96113.1 | KDR95606.1 | CLIT_5c01250 | CLIT_10c03330 | Putative CheW protein. | Response regulator receiver protein. | 0.965 |
KDR96113.1 | KDR96787.1 | CLIT_5c01250 | CLIT_2c03930 | Putative CheW protein. | Sensor histidine kinase response regulator. | 0.999 |
KDR96113.1 | cheA | CLIT_5c01250 | CLIT_11c02140 | Putative CheW protein. | Chemotaxis protein CheA. | 0.996 |
KDR96113.1 | cheA-2 | CLIT_5c01250 | CLIT_14c00190 | Putative CheW protein. | Chemotaxis protein CheA. | 0.996 |
KDR96113.1 | cheB | CLIT_5c01250 | CLIT_11c02130 | Putative CheW protein. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.981 |
KDR96113.1 | cheD | CLIT_5c01250 | CLIT_11c02170 | Putative CheW protein. | Putative chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.858 |
KDR96113.1 | cheR | CLIT_5c01250 | CLIT_11c01830 | Putative CheW protein. | Chemotaxis protein methyltransferase CheR. | 0.895 |
KDR96113.1 | cheV | CLIT_5c01250 | CLIT_14c00090 | Putative CheW protein. | Chemotaxis protein CheV. | 0.922 |
KDR96113.1 | cheW | CLIT_5c01250 | CLIT_11c02150 | Putative CheW protein. | Purine-binding chemotaxis protein CheW. | 0.873 |
KDR96113.1 | tlpB-2 | CLIT_5c01250 | CLIT_13c02170 | Putative CheW protein. | Methyl-accepting chemotaxis protein TlpB. | 0.918 |
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