STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR94628.1Transcription factor domain-containing protein. (587 aa)    
Predicted Functional Partners:
KDR94627.1
Group 2 family glycosyl transferase.
 
  
 0.974
KDR94626.1
Cellulose synthase domain-containing protein.
 
  
 0.970
KDR94629.1
GGDEF domain-containing protein.
 
   
 0.963
KDR94630.1
Glycoside hydrolase family 8.
 
  
 0.956
KDR95658.1
Hypothetical protein.
  
     0.556
KDR93808.1
Hypothetical protein.
  
     0.540
KDR93997.1
Hypothetical protein.
  
     0.534
KDR94963.1
Hypothetical protein.
  
     0.484
KDR96128.1
Hypothetical protein.
  
     0.454
spsC
Spore coat polysaccharide biosynthesis protein SpsC; Belongs to the DegT/DnrJ/EryC1 family.
       0.423
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.