STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR94465.14Fe-4S binding protein. (71 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
  
 0.998
hndC
NADP-reducing hydrogenase subunit HndC.
  
 0.997
hndC-3
NADP-reducing hydrogenase subunit HndC.
  
 0.997
nuoG1
NADH-quinone oxidoreductase subunit G 2.
  
 0.995
vorB
Ketoisovalerate oxidoreductase subunit VorB.
 
 0.992
vorA1
Ketoisovalerate oxidoreductase subunit VorA.
 
 0.991
vorA
Ketoisovalerate oxidoreductase subunit VorA.
 
 0.989
nuoN
NADH-quinone oxidoreductase subunit N.
  
 0.987
vorB-2
Ketoisovalerate oxidoreductase subunit VorB.
 
 0.972
vorA1-2
Ketoisovalerate oxidoreductase subunit VorA.
 
 0.966
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.