STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zwfGlucose-6-phosphate 1-dehydrogenase Zwf; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (489 aa)    
Predicted Functional Partners:
KDR93792.1
6-phosphogluconate dehydrogenase, decarboxylating.
  
 0.997
pyk
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
  
 
 0.959
pgi
Glucose-6-phosphate isomerase Pgi; Belongs to the GPI family.
  
 
 0.956
gap
Glyceraldehyde-3-phosphate dehydrogenase Gap; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 0.949
tal
Putative transaldolase Tal; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 0.936
glkA
Glucokinase GlkA.
 
 
 0.913
ilvD
Dihydroxy-acid dehydratase IlvD; Belongs to the IlvD/Edd family.
  
 
 0.892
tkt
Transketolase Tkt; Belongs to the transketolase family.
  
 0.891
fba
Fructose-bisphosphate aldolase Fba.
   
 
 0.890
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
   
 
  0.881
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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