Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apt | hcrC | CLIT_5c01040 | CLIT_10c04670 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 4-hydroxybenzoyl-CoA reductase subunit gamma. | 0.429 |
| apt | hpt-3 | CLIT_5c01040 | CLIT_5c01410 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.896 |
| apt | mtaD-2 | CLIT_5c01040 | CLIT_23c01860 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 5-methylthioadenosine/S-adenosylhomocysteine deaminase MtaD. | 0.790 |
| apt | mtnN | CLIT_5c01040 | CLIT_23c02860 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.559 |
| apt | pdp-2 | CLIT_5c01040 | CLIT_23c01850 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Pyrimidine-nucleoside phosphorylase Pdp. | 0.436 |
| apt | punA | CLIT_5c01040 | CLIT_10c00660 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.923 |
| apt | punA-2 | CLIT_5c01040 | CLIT_23c01840 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine nucleoside phosphorylase 1. | 0.853 |
| apt | rihA | CLIT_5c01040 | CLIT_23c03140 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Pyrimidine-specific ribonucleoside hydrolase RihA. | 0.862 |
| apt | xdhD | CLIT_5c01040 | CLIT_10c04660 | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Putative hypoxanthine oxidase XdhD. | 0.429 |
| hcrC | apt | CLIT_10c04670 | CLIT_5c01040 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.429 |
| hcrC | mtaD-2 | CLIT_10c04670 | CLIT_23c01860 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | 5-methylthioadenosine/S-adenosylhomocysteine deaminase MtaD. | 0.754 |
| hcrC | rnfB | CLIT_10c04670 | CLIT_23c03290 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.526 |
| hcrC | xdhD | CLIT_10c04670 | CLIT_10c04660 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Putative hypoxanthine oxidase XdhD. | 0.999 |
| hpt-3 | apt | CLIT_5c01410 | CLIT_5c01040 | Hypoxanthine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.896 |
| hpt-3 | mtaD-2 | CLIT_5c01410 | CLIT_23c01860 | Hypoxanthine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 5-methylthioadenosine/S-adenosylhomocysteine deaminase MtaD. | 0.792 |
| hpt-3 | mtnN | CLIT_5c01410 | CLIT_23c02860 | Hypoxanthine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.445 |
| hpt-3 | punA | CLIT_5c01410 | CLIT_10c00660 | Hypoxanthine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.931 |
| hpt-3 | punA-2 | CLIT_5c01410 | CLIT_23c01840 | Hypoxanthine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Purine nucleoside phosphorylase 1. | 0.869 |
| hpt-3 | rihA | CLIT_5c01410 | CLIT_23c03140 | Hypoxanthine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Pyrimidine-specific ribonucleoside hydrolase RihA. | 0.860 |
| mtaD-2 | apt | CLIT_23c01860 | CLIT_5c01040 | 5-methylthioadenosine/S-adenosylhomocysteine deaminase MtaD. | Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.790 |
page 1 of 4