STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreCCell shape-determining protein MreC; Involved in formation and maintenance of cell shape. (295 aa)    
Predicted Functional Partners:
mreB-2
Rod shape-determining protein MreB.
 
 
 0.997
KDR94062.1
Hypothetical protein.
  
 
 0.994
mreB
Rod shape-determining protein MreB.
 
 
 0.987
mrdA
Penicillin-binding protein 2.
 
 
 0.987
KDR94059.1
Hypothetical protein UPF0758; Belongs to the UPF0758 family.
  
  
 0.975
minC
Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.969
minD
Septum site-determining protein MinD.
  
    0.930
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.879
spoVE-2
Stage V sporulation protein E; Belongs to the SEDS family.
 
  
 0.877
pbpA
Penicillin-binding protein A.
 
 
 0.775
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.