Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KDR94204.1 | argG | CLIT_23c04770 | CLIT_5c00180 | Aspartate aminotransferase. | Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.859 |
| KDR94204.1 | argJ1 | CLIT_23c04770 | CLIT_23c03930 | Aspartate aminotransferase. | Arginine biosynthesis bifunctional protein ArgJ 1; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.834 |
| KDR94204.1 | lpdA-3 | CLIT_23c04770 | CLIT_2c03340 | Aspartate aminotransferase. | Dihydrolipoyl dehydrogenase LpdA. | 0.874 |
| KDR94204.1 | metH | CLIT_23c04770 | CLIT_2c03470 | Aspartate aminotransferase. | Methionine synthase MetH. | 0.837 |
| KDR94204.1 | nifJ | CLIT_23c04770 | CLIT_17c00090 | Aspartate aminotransferase. | Pyruvate-flavodoxin oxidoreductase NifJ. | 0.952 |
| KDR94204.1 | pheA | CLIT_23c04770 | CLIT_17c00200 | Aspartate aminotransferase. | P-protein PheA. | 0.957 |
| KDR94204.1 | purA | CLIT_23c04770 | CLIT_4c01880 | Aspartate aminotransferase. | Adenylosuccinate synthetase PurA; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.847 |
| KDR94204.1 | pyk | CLIT_23c04770 | CLIT_13c02080 | Aspartate aminotransferase. | Pyruvate kinase Pyk; Belongs to the pyruvate kinase family. | 0.851 |
| KDR94204.1 | tdcB | CLIT_23c04770 | CLIT_23c03570 | Aspartate aminotransferase. | L-threonine dehydratase catabolic TdcB. | 0.829 |
| KDR94204.1 | tyrA | CLIT_23c04770 | CLIT_17c00240 | Aspartate aminotransferase. | Prephenate dehydrogenase TyrA. | 0.914 |
| argG | KDR94204.1 | CLIT_5c00180 | CLIT_23c04770 | Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate aminotransferase. | 0.859 |
| argG | argJ1 | CLIT_5c00180 | CLIT_23c03930 | Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Arginine biosynthesis bifunctional protein ArgJ 1; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.974 |
| argG | lpdA-3 | CLIT_5c00180 | CLIT_2c03340 | Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Dihydrolipoyl dehydrogenase LpdA. | 0.548 |
| argG | pheA | CLIT_5c00180 | CLIT_17c00200 | Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | P-protein PheA. | 0.763 |
| argG | purA | CLIT_5c00180 | CLIT_4c01880 | Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Adenylosuccinate synthetase PurA; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.922 |
| argG | pyk | CLIT_5c00180 | CLIT_13c02080 | Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Pyruvate kinase Pyk; Belongs to the pyruvate kinase family. | 0.400 |
| argJ1 | KDR94204.1 | CLIT_23c03930 | CLIT_23c04770 | Arginine biosynthesis bifunctional protein ArgJ 1; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Aspartate aminotransferase. | 0.834 |
| argJ1 | argG | CLIT_23c03930 | CLIT_5c00180 | Arginine biosynthesis bifunctional protein ArgJ 1; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.974 |
| argJ1 | lpdA-3 | CLIT_23c03930 | CLIT_2c03340 | Arginine biosynthesis bifunctional protein ArgJ 1; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Dihydrolipoyl dehydrogenase LpdA. | 0.437 |
| argJ1 | nifJ | CLIT_23c03930 | CLIT_17c00090 | Arginine biosynthesis bifunctional protein ArgJ 1; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Pyruvate-flavodoxin oxidoreductase NifJ. | 0.648 |
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