STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtbC2Dimethylamine corrinoid protein 2. (225 aa)    
Predicted Functional Partners:
mtaA
methylcobamide:CoM methyltransferase MtaA; Belongs to the uroporphyrinogen decarboxylase family.
 
 0.977
mtaA1
methylcobamide:CoM methyltransferase MtaA; Belongs to the uroporphyrinogen decarboxylase family.
 
 0.960
metH
Methionine synthase MetH.
 
 
0.953
KDR96023.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.935
hemE
Uroporphyrinogen decarboxylase; URO-D; Belongs to the uroporphyrinogen decarboxylase family.
 
 0.910
mtaA-2
methylcobamide:CoM methyltransferase MtaA; Belongs to the uroporphyrinogen decarboxylase family.
 
 0.908
deoC
Deoxyribose-phosphate aldolase DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
 0.899
deoC-2
Deoxyribose-phosphate aldolase DeoC.
   
 0.899
mtaA2
methylcobamide:CoM methyltransferase MtaA; Belongs to the uroporphyrinogen decarboxylase family.
 
 0.869
KDR95623.1
uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.850
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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