STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potGPutrescine transport ATP-binding protein PotG. (227 aa)    
Predicted Functional Partners:
fbpB2
Fe(3+)-transport system permease protein FbpB 2.
 
 0.978
futA1
Iron uptake protein A1.
 
 
 0.959
pstB1
Phosphate import ATP-binding protein PstB 1.
 
 
 
0.932
macB-2
Macrolide export ATP-binding/permease protein MacB.
 
 
    0.896
macB-3
Macrolide export ATP-binding/permease protein MacB.
 
 
    0.895
KDR95880.1
Putative peptide transport system permease protein.
 
    0.894
macB
Macrolide export ATP-binding/permease protein MacB.
 
 
    0.889
dppC
Dipeptide transport system permease protein DppC.
 
    0.877
potD
Spermidine/putrescine-binding periplasmic protein PotD.
 
 0.867
potB
Spermidine/putrescine transport system permease protein PotB.
 0.851
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.