STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR96028.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
fliS-2
Flagellar protein FliS.
  
     0.595
KDR94827.1
Hypothetical protein.
  
     0.553
KDR94008.1
Hypothetical protein.
  
     0.517
KDR94745.1
Hypothetical protein.
  
     0.515
KDR96029.1
Radical SAM superfamily protein.
       0.493
KDR96030.1
Tetratricopeptide repeat protein.
 
     0.481
KDR96371.1
Putative transcriptional regulator.
  
     0.476
KDR95304.1
Hypothetical protein.
  
     0.434
KDR93877.1
Hypothetical protein.
  
     0.434
KDR96342.1
Hypothetical protein.
  
     0.413
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.