STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR96043.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
ilvB-3
Acetolactate synthase large subunit IlvB.
  
 0.954
ilvC-2
Ketol-acid reductoisomerase IlvC; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
  
 
 0.949
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
  
 
 0.923
tdcB
L-threonine dehydratase catabolic TdcB.
  
 
 0.919
ilvB
Acetolactate synthase large subunit IlvB.
  
 0.891
ilvG
Acetolactate synthase isozyme 2 large subunit IlvG.
  
 0.891
ilvB-2
Putative acetolactate synthase large subunit IlvB.
  
 0.891
ilvD
Dihydroxy-acid dehydratase IlvD; Belongs to the IlvD/Edd family.
  
 0.887
serA
D-3-phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.862
pyk
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
     
 0.808
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.