STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95843.1Sensor histidine kinase. (584 aa)    
Predicted Functional Partners:
srrA-2
Transcriptional regulatory protein SrrA.
 0.975
barA
Signal transduction histidine-protein kinase BarA.
 
0.945
KDR95606.1
Response regulator receiver protein.
 
 0.938
KDR95527.1
Diguanylate cyclase/phosphodiesterase.
  
 0.935
KDR96787.1
Sensor histidine kinase response regulator.
 
 
0.933
phoP-3
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 0.894
KDR96665.1
Response regulator.
 0.893
KDR95499.1
Response regulator receiver.
 0.892
KDR95000.1
Two component transcriptional regulator, winged helix family.
 0.890
srrA
Transcriptional regulatory protein SrrA.
 0.890
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.